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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ONIVA01G43260.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 349aa MW: 36202.5 Da PI: 6.3474 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ONIVA01G43260.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.7 | 7.8e-20 | 127 | 176 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp + +r++lg+f tae Aa+a+++a+++++g
ONIVA01G43260.1 127 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDEAALRFRG 176
7********.**********7.....337************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 349 aa
Download sequence Send
to blast |
MTVAGASELM SGYYQAQEMS TMVSALARVV AGGGGGDGDG DQWAWSSPSP SSSAAAAAAR 60 GVQERRREEQ AMHELAGYAC GGAPSPEFAG SEQSSDTQSA SAATMDEHHS PVGGGGNAEG 120 PDTPRRRYRG VRQRPWGKWA AEIRDPHKAA RVWLGTFETA EAAARAYDEA ALRFRGSRAK 180 LNFPEDARLY PTAATTTTAA PPPAPVAAAS PSAAIYPGAS QSAEYLRYQM LLQGRLTTAT 240 PNQGTLLPFY GGGGGGGSMT NPYGGGGGGA MSGFLGSYYS FPTPSVSVAT VPSSTSSAPG 300 NYYSSHGGSH QSMSAAEEWN WENALVYPAT AASWSESSYH HHPPPPHTQ
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP003286 | 0.0 | AP003286.3 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0677H08. |
GenBank | AP014957 | 0.0 | AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence. |