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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ONIVA01G05270.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 442aa MW: 49050.9 Da PI: 7.8469 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ONIVA01G05270.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 49.3 | 1.2e-15 | 195 | 244 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54
s+y+GVr++ +g+W+AeIrd + r r ++g+f ++eeAa+a+ a ++++
ONIVA01G05270.1 195 SKYRGVRRRA-WGKWAAEIRDpV-----RkSRKWIGTFNSEEEAAAAYLAQSNQFH 244
89*****777.**********44.....55******************88766665 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 442 aa
Download sequence Send
to blast |
MSPSPSLVHI TRFASLLRSS SSFSLLRFAS KSPAISPPKT SPPPTTTINK PLLLLLFFLL 60 RLAISPPPPP HSLTSCHVIR AIDRVVASAA FAANGFFLLP SHPPPSKLVY EGRKNTAKSL 120 HDLQMMVPSS RKVRVFCSDP DATDSSDEDD QNKKERRFSR EILIPMENSK ASKPVKTLVQ 180 CGTKTVKDSE KEPTSKYRGV RRRAWGKWAA EIRDPVRKSR KWIGTFNSEE EAAAAYLAQS 240 NQFHEELMAL KIQSSVSEQE DLSSSVTISC VSSSQSCDQK IQAKPQEHKR VSVVVNRETV 300 EQKFKAQPQA QKIKAQPEVQ KRVSVKISHE TEDEHLLNLP STPKGKEISM GAVLGRIDEI 360 PVSNCVGHID EFPPDDFTRL ADAFPVSDFI GMADVPLGDD YIGLADISHL PLPITDLKFD 420 LNAELNWDGF DFASLEQELN CL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CT831165 | 0.0 | CT831165.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI221K24, full insert sequence. |