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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ONIVA01G01990.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
MYB |
Protein Properties |
Length: 350aa MW: 38384.2 Da PI: 6.5036 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ONIVA01G01990.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 54.5 | 2.7e-17 | 30 | 77 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT eEd ll ++++ +G g+W++ ar+ g++Rt+k+c++rw++yl
ONIVA01G01990.1 30 RGPWTLEEDNLLMNYIACHGEGRWNLLARCSGLKRTGKSCRLRWLNYL 77
89********************************************97 PP
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2 | Myb_DNA-binding | 53.6 | 5e-17 | 83 | 126 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+ T+eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++
ONIVA01G01990.1 83 RGNLTPEEQLLILELHSKWGNR-WSRIAQHLP-GRTDNEIKNYWRT 126
7999******************.*********.***********96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 350 aa
Download sequence Send
to blast |
MSQRRVAGPM GVMSKQQQEA MAEEMMELRR GPWTLEEDNL LMNYIACHGE GRWNLLARCS 60 GLKRTGKSCR LRWLNYLKPD IKRGNLTPEE QLLILELHSK WGNRWSRIAQ HLPGRTDNEI 120 KNYWRTRVQK QARQLKVDAN STVFRDAVRC YWMPRLLEKM AGAATDPTPP PPPPLHHHAA 180 MATASSSPFD FDTHLQQAEA ATACVVPNNV YHHHIDPSPS TSTSAGSTAA AAAFQPLPCF 240 SELRWDQQMQ SSGELDDGAA GVFVDSASAL GSLSLDGLDL GPAEYYSDST LLDYLNSSCT 300 GSAMMTMMTA SGNAGSYNSC GGAMDGGDTW RSDEVCQAAA RKLGEWGGGI
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Functional Description ? help
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Source |
Description |
UniProt | Transcription repressor of phosphate (Pi) starvation-induced genes. Regulates negatively Pi starvation responses via the repression of gibberellic acid (GA) biosynthesis and signaling. Modulates root architecture, phosphatase activity, and Pi uptake and accumulation. {ECO:0000269|PubMed:19529828}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Slightly induced by salicylic acid (PubMed:16463103). Induced reversibly in response to phosphate (Pi) deficiency but repressed in the presence of Pi, specifically in the leaves. Availability of Pi increases with decreased levels (PubMed:19529828). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:19529828}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK107424 | 0.0 | AK107424.1 Oryza sativa Japonica Group cDNA clone:002-127-F10, full insert sequence. |