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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
OMERI12G14510.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
NAC |
| Protein Properties |
Length: 364aa MW: 40508.1 Da PI: 7.3961 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OMERI12G14510.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 151.2 | 5.1e-47 | 35 | 180 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...............kvkaeekew.yfFskrdkkyatgkrknratk 79
pGfrFhPtd+elv +yL++kve+k++++ ++ike+diyk++PwdLpk +++a eke+ yfF+ r +ky+++ r+nr+t
OMERI12G14510.1 35 FPGFRFHPTDQELVGFYLTRKVEKKPFSI-DIIKEIDIYKHDPWDLPKvshgvalqgssssstTTAAAEKECgYFFCLRGRKYRNSIRPNRVTG 127
69***************************.99***************76899999999888764444667778********************* PP
NAM 80 sgyWkatgkdkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
sg+Wkatg dk+++++ g +glkk+Lv+y+g+a +g+ktdW+mhe+rl
OMERI12G14510.1 128 SGFWKATGIDKPIYDSsslaAGDCIGLKKSLVYYRGSAGRGTKTDWMMHEFRL 180
***************866666666***************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 364 aa
Download sequence Send
to blast |
MEEEKRLERI IKEIDSPISP GGGAALLAED DDLVFPGFRF HPTDQELVGF YLTRKVEKKP 60
FSIDIIKEID IYKHDPWDLP KVSHGVALQG SSSSSTTTAA AEKECGYFFC LRGRKYRNSI 120
RPNRVTGSGF WKATGIDKPI YDSSSLAAGD CIGLKKSLVY YRGSAGRGTK TDWMMHEFRL 180
PSSISDSDHL QDASETWTIC RIFKRSMTYT KGRAAAAASM NKRISHQLQH IHQQQQQFYY 240
HEVVHDHHHR RLHLQHYAGS ASMAAAAANS VVDVIDHSSD AETTTRSHSH SQSHLVADIR 300
HLQSPFMLDF HAGTASSSSS TAAAGWSEVM SFSRDGGSSS GSSWDELGRI MDISTNSANN 360
NYYL
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-43 | 36 | 205 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-43 | 36 | 205 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-43 | 36 | 205 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-43 | 36 | 205 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 3e-43 | 36 | 205 | 22 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 3e-43 | 36 | 205 | 22 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 3e-43 | 36 | 205 | 22 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 3e-43 | 36 | 205 | 22 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 3e-43 | 36 | 205 | 22 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 3e-43 | 36 | 205 | 22 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 3e-43 | 36 | 205 | 22 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 3e-43 | 36 | 205 | 22 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 2e-43 | 36 | 205 | 19 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 2e-43 | 36 | 205 | 19 | 165 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012620 | 0.0 | CP012620.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 12 sequence. |
