 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OMERI12G12170.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
G2-like |
| Protein Properties |
Length: 349aa MW: 37315.3 Da PI: 8.8403 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OMERI12G12170.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 71.5 | 1.3e-22 | 85 | 129 | 2 | 46 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehv 46
pr+rWt+ LH++Fv+ave LGG+e+AtPk++lelm+vk+Ltl+h+
OMERI12G12170.1 85 PRMRWTTALHAHFVHAVELLGGHERATPKSVLELMNVKDLTLAHM 129
9*****************************************996 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 349 aa
Download sequence Send
to blast |
MSTTTSSSSD EAATAAMAPD LSLHISPPSP RLELGLADDT AVVAAKTTTD DERRRRHHQP 60
IQTAHGFKKS SGGGGGGGKR SARAPRMRWT TALHAHFVHA VELLGGHERA TPKSVLELMN 120
VKDLTLAHMY RTVKGTDRSC VAGHGQASRE MSFLMRRGLV AEVDSFDGFN NNNNNMVNTT 180
SNNTTSSPSH QESSSCRIFR AEIWKGAAAA AHDHHDQEAA TAAALHHDQP RRRLDHIVAG 240
RPPPPPASSS GGGGGGDTMA SSLDWLLASR RQKQHDYGDH YDGDGGYYTA AHRGQAAAAM 300
SAAAAASGVV KDRRPSLEMS LGRQGWEITM EQRSSVESSS KELTLLKCL
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK109727 | 0.0 | AK109727.1 Oryza sativa Japonica Group cDNA clone:002-146-B09, full insert sequence. |
| GenBank | AL954829 | 0.0 | AL954829.6 Oryza sativa chromosome 12, . BAC OSJNBa0044E20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence. |
| GenBank | AP014968 | 0.0 | AP014968.1 Oryza sativa Japonica Group DNA, chromosome 12, cultivar: Nipponbare, complete sequence. |
