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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OMERI11G15200.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 365aa MW: 38451.8 Da PI: 4.5033 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OMERI11G15200.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.2 | 4.8e-19 | 42 | 91 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++ GVr+++ +grWvAeI+d ++ r++lg+f+taeeAa+a+++a+ l+g
OMERI11G15200.1 42 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 91
789******.7*********33....35**********************99998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0000302 | Biological Process | response to reactive oxygen species |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009723 | Biological Process | response to ethylene |
GO:0035865 | Biological Process | cellular response to potassium ion |
GO:0048528 | Biological Process | post-embryonic root development |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 365 aa
Download sequence Send
to blast |
MATARVASPP STDRKRKASD DDIDAAAAAL TSPPAAPRGR KRFVGVRQRP SGRWVAEIKD 60 TIQKIRVWLG TFDTAEEAAR AYDEAACLLR GANTRTNFWP RPSPPPPPAP PETATPALPS 120 KVTNLLLLRL KARNQQLVDA GAAAAPQEAA LLQLQQQTPA SCQEVFVRGH GEDQYGFHVD 180 DFLSDEHSGD SSLGLDDDDG EEEVEEEEDE LDFQFMDAAP GASAAAGLGG EGALCSPFEM 240 VAAELGGAVD VAAHDAMRQM DYERKISASL YALTGVSECL RIRAAAARDH LTGLREACRK 300 KQKFAAAAAA TAAPPQQQEP SPPPQQPETA SGGGGMSETA SGGGGGDGDV LMWSSLDLAP 360 ICHMA
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012620 | 0.0 | CP012620.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 12 sequence. |