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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OMERI07G16350.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 357aa MW: 38110.6 Da PI: 9.3267 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OMERI07G16350.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 54.5 | 3e-17 | 91 | 141 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s++ GVr+++ +grWvAeI+d + ++ r +lg+f ta+ Aa+a+++a++ l+g
OMERI07G16350.1 91 SKFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETADAAARAYDEAARLLRG 141
79********.7*********32...35***********************9998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 357 aa
Download sequence Send
to blast |
MPTIKPSSRE QAVGTQTPVS PTLTLSNQNI KKTKKKHKLT HKHMELNFQV QPPVFQLQDY 60 CYYYSQEVAA ASPAAKPTKP RGRKKGSTSH SKFVGVRQRP SGRWVAEIKD TTQKIRMWLG 120 TFETADAAAR AYDEAARLLR GAEARTNFAP RISPDCPLAV RIRGLLHHKK LKKARSAAAA 180 TAGSSGAASK KRSTTAAAAA TPTITTTSNS NSDGSGSACG GSSSSSSSTD SCDGAVKQGG 240 GGGGGATMDA SEVYRPDFVH AGAEEFDSWM FDTAFGPFPE LDSFAAVDAV TPPPATASPE 300 DSSAGTPPVE MAEFERIKVE RRISASLYAM NGLQEYFDKV FDASACDPFW DFSPLCH
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP003758 | 0.0 | AP003758.4 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1562_B11. |
GenBank | AP003845 | 0.0 | AP003845.3 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1699_E05. |
GenBank | AP014963 | 0.0 | AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence. |