 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OMERI07G12560.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
Dof |
| Protein Properties |
Length: 289aa MW: 28042.3 Da PI: 7.5838 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OMERI07G12560.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 66.1 | 6.1e-21 | 2 | 35 | 29 | 62 |
zf-Dof 29 PryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
Pr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+s+
OMERI07G12560.1 2 PRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRSR 35
9******************************986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 289 aa
Download sequence Send
to blast |
MPRHFCKACK RYWTRGGTLR NVPVGGGCRK NKRSRSGGAA PGGGVGRGGP GGGAAAAAAV 60
SSAGGAAGTS PALPQPGSLP SLSSALGLTG GTSLASLLLG SGGSGGDHLG LFQAMQSVVS 120
DAAAFEMHQQ HQSQVDHLLG LGYGAAGAQI QAAKPWLHDG GATGGLLDGF YAPLLSGSIV 180
PGLEELQVKA EATTGDHQQK SSAAAAAAAG EQSWDLPTPS SSNVEASIIA SDALMAAAAA 240
SMNPAVSAAA ASMAPSAQSL LYWGNGGIGA AAAAWPDLAN CGSSIATLF
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP003815 | 0.0 | AP003815.2 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1163_G04. |
| GenBank | AP014963 | 0.0 | AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012615 | 0.0 | CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence. |
