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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OMERI05G11290.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 436aa MW: 46978.1 Da PI: 4.4505 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OMERI05G11290.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.5 | 1.7e-18 | 131 | 181 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++++GVr++ +g+WvAeIr+p + r r +lg+f tae Aa a+++a+++++g
OMERI05G11290.1 131 CDFRGVRQRT-WGKWVAEIREP---N-RqSRLWLGTFPTAEAAACAYDEAARAMYG 181
689****999.**********8...3.35************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009408 | Biological Process | response to heat |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009651 | Biological Process | response to salt stress |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 436 aa
Download sequence Send
to blast |
MTVDQRTTAI MPPVEMPPVQ PGRKCGGKES TGNLDSVQPI AGALPCNEHA LLAQQTPKGD 60 APSVGSKIWK KRPRRSRDGP TSVAETIKRW AELNNQQELD PQGPKKARKA PAKGSKKGCM 120 KGKGGPENTR CDFRGVRQRT WGKWVAEIRE PNRQSRLWLG TFPTAEAAAC AYDEAARAMY 180 GPMARTNFGQ HHAPAASVQV AQAAVKCALP GGGLTASKSR TSTQGAPADV QDVLTGGLSA 240 CESTTTTINN QSDVVSTLHK PEEVSEISSP LRAPPAVLED GSNKDTAESV TYDENIVSQQ 300 RAPPEAEASN GRGEEVFEPL EPIASLPEDQ GDYCFDIDEM LRMMEADPTN EGSWKGDKDG 360 SDAILELGQD EPFYYEGVDP GMLDNLLRSD EPAWLSADPA MFISGGFEDD SQFFEADPAI 420 FISGGFEDDS QFFEGL
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE). Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. Involved in drought and heat-shock stress tolerance. {ECO:0000269|PubMed:20049613}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By heat shock, high-salt and drought stresses. {ECO:0000269|PubMed:20049613}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JF915845 | 0.0 | JF915845.1 Oryza sativa dehydration responsive element binding protein 2B isoform c (DREB2B) mRNA, complete cds, alternatively spliced. |