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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OMERI05G10040.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 272aa MW: 29418.8 Da PI: 9.8507 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OMERI05G10040.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58 | 2.3e-18 | 90 | 139 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+++GVr+++ +gr+ AeIrdp + kr +lg+f+taeeAa+ ++ a+++++g
OMERI05G10040.1 90 RFRGVRRRP-WGRFSAEIRDP-----SlqKRLWLGTFDTAEEAAAVYDDAALRIKG 139
69*******.**********9.....445************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 272 aa
Download sequence Send
to blast |
MSPADSLAAG RSRRVGASMP RPKRVRVYFV DADATDTDSS GDERSRRLVR EVIDIDVGAA 60 SPAPKHPRRL VPTATAALAR RRAGMAASRR FRGVRRRPWG RFSAEIRDPS LQKRLWLGTF 120 DTAEEAAAVY DDAALRIKGS HAVTNFPSDS DTPSAKAKQM NLHPRRHTTP DKTTTTSSAA 180 AAAVPDTTPA PPEEDRANDS TFNPFASPTS VLRYASADEV AAPSFEHLLV ELGDLSAPPP 240 STKAAEFDWL PWWEGEDFVT AGLTASNAVS VK
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 80 | 97 | RRAGMAASRRFRGVRRRP |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC124141 | 0.0 | AC124141.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OSJNBa0065C11, complete sequence. |
GenBank | AK110613 | 0.0 | AK110613.1 Oryza sativa Japonica Group cDNA clone:002-168-H06, full insert sequence. |
GenBank | AP014961 | 0.0 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |