 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OMERI03G31870.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 323aa MW: 33437.2 Da PI: 5.2121 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OMERI03G31870.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 104.1 | 7.7e-33 | 141 | 198 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers++dp+vv++tYeg+H h+
OMERI03G31870.1 141 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSDDPSVVITTYEGQHCHH 198
8******************************************************997 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MAGAEWSPFD GDAAFAEYSS AVLAELGGWA APGEEGGAGM MVPAALDLPV DVVGTAAAAA 60
ARGEEEEEEE EEAPARSGDG AAAASSSSSG EPAAPDNADK RPAAAEAAPP AAATATAKKG 120
QKRARQPRFA FMTKSEIDHL EDGYRWRKYG QKAVKNSPFP RSYYRCTNSK CTVKKRVERS 180
SDDPSVVITT YEGQHCHHTA SFQRGVGGAA VGAHIHGAAA VALAEQMSAF VSASPQPLAP 240
PQPHMLYGLP RLHPPSSSET VVSCSMPTTS LQELNNGEGL QRPGCNSPQA AVTIAQPPPS 300
VPPAVSFDKG LLDDIVPPGV RLG
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AY341859 | 0.0 | AY341859.1 Oryza sativa (japonica cultivar-group) WRKY19 mRNA, complete cds. |
