 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OMERI03G29830.2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
GATA |
| Protein Properties |
Length: 248aa MW: 26594.8 Da PI: 5.759 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OMERI03G29830.2 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 47 | 3.6e-15 | 166 | 201 | 1 | 34 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34
C+nCg ++ Tp +Rrgp g+++LCnaCGl+++ kg
OMERI03G29830.2 166 CQNCGISSrlTPAMRRGPAGPRSLCNACGLMWANKG 201
********************************9987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0005978 | Biological Process | glycogen biosynthetic process |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0019252 | Biological Process | starch biosynthetic process |
| GO:0009570 | Cellular Component | chloroplast stroma |
| GO:0009941 | Cellular Component | chloroplast envelope |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0005515 | Molecular Function | protein binding |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0008878 | Molecular Function | glucose-1-phosphate adenylyltransferase activity |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 248 aa
Download sequence Send
to blast |
MAAEPPADGR DHPADDGAAG DGAAESAAAE ALLSAASEQL TLVYQGEVYV FDPVPPQKVQ 60
AVLLVLGGSD MPPGLVSMAV PTTFDEKSTT VAARRVASLM RFREKRKERC FDKKIRYSVR 120
KEVAQKMKRR KGQFAGRADF GDGSCSSAPC GSTANGEDDH IRETHCQNCG ISSRLTPAMR 180
RGPAGPRSLC NACGLMWANK GDTDDSKANL CAEHNQTTMK TDTEMVPEQE QKADVLPPTK 240
EEDSMATS
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250|UniProtKB:Q8LAU9}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By abscisic acid (ABA), and drought and salt stresses. Down-regulated by jasmonate and wounding. {ECO:0000269|PubMed:19618278}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK288076 | 0.0 | AK288076.1 Oryza sativa Japonica Group cDNA, clone: J075163P08, full insert sequence. |
