PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMERI03G27480.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 545aa MW: 59841.3 Da PI: 9.3246 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.5 | 9e-11 | 215 | 241 | 7 | 33 |
HHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaeieeLee 33 rr+++NReAAr+sR+RKka+i++Le OMERI03G27480.1 215 MRRLAQNREAARKSRLRKKAYIQQLES 241 69***********************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.2E-7 | 207 | 255 | No hit | No description |
SMART | SM00338 | 1.8E-5 | 208 | 284 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.128 | 211 | 255 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.13E-6 | 213 | 249 | No hit | No description |
Pfam | PF00170 | 1.6E-7 | 214 | 242 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 216 | 231 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.7E-29 | 293 | 367 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 545 aa Download sequence Send to blast |
MEKPLKGRSK KFELALRSDS WRYWEIELWF CGSMGEARRG QNPHHVLGYG FHGTTLPNSM 60 TSANLFEQGG GGGGGADYFG ELEEALVHQV ATLRRRAQQT ATTTTSHHGH TTPFSTAAAA 120 ATATARPPAT LDIFPSWPMR SSLPTPKDGC SNVTADTTDS ESSSKNNGDQ GAAAADMASQ 180 FDQIPQQQQK QHKKMAASST HSDHRMTKTL DPKIMRRLAQ NREAARKSRL RKKAYIQQLE 240 SSKLRLAQME QDLERARSQG LLLGGSPGGN TSAGAAMFDA EYGRWLEDGG RRMAELHGGL 300 HAHLPDGDLR AIVDDALAHY DELFRLRAAA AKADVFHLIT GTWATPAERC FLWMAGFRPS 360 DLLKTVAPRL DPLTEQQVVG ICSLQQSSQQ AEEALSQGLE QLHQSLAETV ANGGSVVDEA 420 SLGSFMGYMA LALGKLSNLE GFVIQADNLR QQTLHQMHRI LTIRQAARCF LAIGEYHNRL 480 RALSSLWASH PRESQLTKFK YLTVEALGAG DAATGQRWTG TPLEEALTRG MGDGRRRRRQ 540 GQRRC |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK101620 | 0.0 | AK101620.1 Oryza sativa Japonica Group cDNA clone:J033052J02, full insert sequence. | |||
GenBank | FJ750929 | 0.0 | FJ750929.1 Oryza sativa clone KCS115G01 DNA-binding protein mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015619722.1 | 0.0 | transcription factor TGAL11 | ||||
Swissprot | Q2QXL0 | 0.0 | TGL11_ORYSJ; Transcription factor TGAL11 | ||||
TrEMBL | A0A0E0D591 | 0.0 | A0A0E0D591_9ORYZ; Uncharacterized protein | ||||
STRING | OPUNC12G03020.1 | 0.0 | (Oryza punctata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4444 | 36 | 70 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.2 | 1e-123 | bZIP family protein |
Publications ? help Back to Top | |||
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