 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OMERI03G02220.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
G2-like |
| Protein Properties |
Length: 402aa MW: 42431.2 Da PI: 7.9409 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OMERI03G02220.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 101 | 7.9e-32 | 21 | 74 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWtp+LH++Fv+a+++LGG++kAtPk++l+lm+v gLt++hvkSHLQ+YR
OMERI03G02220.1 21 PRLRWTPDLHHCFVHAIHKLGGQDKATPKRVLQLMGVGGLTISHVKSHLQMYRN 74
8****************************************************5 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 402 aa
Download sequence Send
to blast |
MVGGGRERNG GVRQYNRSKV PRLRWTPDLH HCFVHAIHKL GGQDKATPKR VLQLMGVGGL 60
TISHVKSHLQ MYRNMRNDLG MQGIQVDQEH TYGGGVEVWT DMQQCDHDEC DVPCCSCHSP 120
KPRKEPLLHL QLKSSGMNID EPGTRARIAA PNVRSCRDDA AASETETRRR RGGRPEEEDD 180
DANASASPRT SQLQLLRLRG HGIRESDMSS SPPSTSLRCY YVRSQRTTTT MPPGAAAAAA 240
GGDGGSQCYA APRYSSSSKL KFLGFVVTSG PPPPPPRLPP PAAACCCGSD DNIPFQVGTF 300
HQHRVAPPTA SCGGGGRAEA RPSSYRSVWF EPAAAAGAAA SNNGVAPDGE HDDGCSLSLS 360
LALDTGCGGA GAGADGSLVS STTSSSSGSR ISLDLSLSTL DS
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 2e-18 | 22 | 76 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 2e-18 | 22 | 76 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 2e-18 | 22 | 76 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 2e-18 | 22 | 76 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012611 | 0.0 | CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence. |
