![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
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TF ID |
OMERI02G29850.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
bHLH |
Protein Properties |
Length: 442aa MW: 48565.4 Da PI: 10.4312 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OMERI02G29850.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Ome&pid=OMERI02G29850.1) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 12.4 | 0.0003 | 190 | 207 | 2 | 19 |
HHHHHHHHHHHHHHHHHH CS
HLH 2 rrahnerErrRRdriNsa 19
r +h++ E+rRR +iN++
OMERI02G29850.1 190 RSKHSATEQRRRTKINDR 207
889*************96 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 442 aa
Download sequence Send
to blast |
MQLFQGEEPA HDFLSLRAGG GSSSPPFQHR EEQHSSHSSR GYGMEMRRSL RPLELAKQRS 60 RSSGNGTAAG SAVDGASPAG SDSEEHVLPG GVGTFSIRHA SGTPSREEAG SHGGVRSSAF 120 AFAPALHGAR MENAHETGGR SGSRAHRAPS TMWQDSAIDQ RSIGKTPYEA TRAEGRSSAS 180 SADQGPSTPR SKHSATEQRR RTKINDRQAS RGLKYFVNSC HTLIRRETKL LSFRRESKSM 240 RKPIQKGITR IPNPFHGYYH SHAKVYYRSC WRNTKNVSQV QGEDLSPSTQ DMNNEQYGPK 300 HISAAQPALF NTQSVTSTTT SSSHMATGTP QNLEKNSTPS NQPPWLSMST MRQESESGNK 360 MPNKHEKQTL HDENHSISSA YSQGLFNRLT EALKKSGLDP SQANIAVEIN LAKRARDNTS 420 DNSKINEDEE PIQITKRRCN KS
|
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK068228 | 0.0 | AK068228.1 Oryza sativa Japonica Group cDNA clone:J013148L19, full insert sequence. |