 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OMERI02G06020.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
G2-like |
| Protein Properties |
Length: 231aa MW: 24902.8 Da PI: 10.1561 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OMERI02G06020.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 100.1 | 1.5e-31 | 25 | 78 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
pr+rW +eLH+rFv+av++LGGs++AtPk+i++lm+ kgLtl+hvkSHLQ+YR
OMERI02G06020.1 25 PRMRWPEELHRRFVDAVRRLGGSHEATPKRIMQLMDAKGLTLSHVKSHLQMYRN 78
9****************************************************6 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 231 aa
Download sequence Send
to blast |
MGGGAGSSSS SSSVVVRRYN RSEAPRMRWP EELHRRFVDA VRRLGGSHEA TPKRIMQLMD 60
AKGLTLSHVK SHLQMYRNSN NSSNVNRRRP VSPRIDWTTQ QDEQQRRQMS SSFSFLATRM 120
VLAAGIGSHG RHQRPHRRQG LPAGDDDGCE LTLSIGGGAG EESSDGGGSS ISDDDELLIQ 180
PAPNIINGST RPPPAANAGA ATKKEAMMSG QTAAAAINLE LTISSPCCWL I
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 7e-16 | 26 | 79 | 3 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 7e-16 | 26 | 79 | 3 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 7e-16 | 26 | 79 | 3 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 7e-16 | 26 | 79 | 3 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK108211 | 1e-168 | AK108211.1 Oryza sativa Japonica Group cDNA clone:002-140-D10, full insert sequence. |
| GenBank | CT831400 | 1e-168 | CT831400.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA117D12, full insert sequence. |
