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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM12G01400.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
WRKY |
Protein Properties |
Length: 370aa MW: 39682.4 Da PI: 7.9178 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM12G01400.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 58.2 | 1.6e-18 | 122 | 186 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSST....TEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedp....kvveitYegeHnhe 59
+Dg++WrKYGqK + ++++rsYYrC+ + gCp++k v++ ++ + k++++ Y g+H+++
OGLUM12G01400.1 122 NDGHQWRKYGQKWISRAKHSRSYYRCANSkvqGCPATKTVQQMDSSGngtsKLFNVDYYGQHTCR 186
8*************************9887889********99876522226899*******995 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 370 aa
Download sequence Send
to blast |
MKILESFGHS DCQVVINMIE HQKALMVELR GMVMPILPSD NEQAKLALQL LGDILSCSDK 60 AISMLELGGD TNKLTNLVGG KRKGDKHSMD NHNLEEEAKE SVSKRRKNAE HTGSTVAQAP 120 HNDGHQWRKY GQKWISRAKH SRSYYRCANS KVQGCPATKT VQQMDSSGNG TSKLFNVDYY 180 GQHTCRGDGI ANPYVVDTAH HSMEPINQNE CNSPTLEHEA HEVQDEKFEN LCMFLVLDVE 240 LLRSAGVRGG GGEGAGGECG TAQQEGGAGA TLRDGATEKD SAREKRAPRP GGTMRVRGGH 300 AWVRRGLPTP DSGAGTADCG PERGVVRKRR DCGVAGDDGR AAAQARWSAS CGAARLGSAL 360 AVRDGAAPGV
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK102093 | 0.0 | AK102093.1 Oryza sativa Japonica Group cDNA clone:J033083A06, full insert sequence. |