![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OGLUM11G03180.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 276aa MW: 28642.8 Da PI: 8.5005 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.8 | 6.4e-10 | 126 | 174 | 1 | 49 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 eke kr rr NRe+Ar +R++a +eL++kv+ L+++N+++kk + OGLUM11G03180.1 126 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLSSQNETMKKVA 174 89********************************************854 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.7E-5 | 124 | 172 | No hit | No description |
SMART | SM00338 | 2.1E-6 | 126 | 191 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.1E-8 | 126 | 173 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 4.51E-9 | 131 | 172 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 276 aa Download sequence Send to blast |
MSDHSSSDGQ RQCRRRGVGV DVELDAAMAL ADMAGAAPGQ PEASPPPHAT QEAAAAAVAV 60 AKGEQEDEAE MASTRLSLEL GKVGIQSSSP CSSSSSVGHP AMQPAAAATA APGYGPRPRH 120 MLTEAEKEAK RLRRVLANRE SARQTILRRQ AIRDELARKV ADLSSQNETM KKVAIRTIKK 180 AAPYQEQPTS SPGGGTAEED TDDDPCSLTL AIDVDKRSAP GAGGSAAGAG QHASISDREK 240 ATAAAEARKR RKELTKLKQM HGGGGGSRPG GGGEHW |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 247 | 252 | RKRRKE |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | |||
GenBank | AK287905 | 0.0 | AK287905.1 Oryza sativa Japonica Group cDNA, clone: J065211O07, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_015615785.1 | 1e-76 | uncharacterized protein LOC4349815 | ||||
TrEMBL | A0A0E0BFG8 | 0.0 | A0A0E0BFG8_9ORYZ; Uncharacterized protein | ||||
STRING | OGLUM11G03180.1 | 0.0 | (Oryza glumipatula) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3165 | 34 | 75 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G19490.1 | 2e-09 | bZIP family protein |