 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OGLUM10G18690.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
MYB_related |
| Protein Properties |
Length: 265aa MW: 29256.1 Da PI: 7.0659 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OGLUM10G18690.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 48.6 | 1.9e-15 | 100 | 144 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT+eE+++++++ +qlG+g+W+ I++ + + Rt+ q+ s+ qky
OGLUM10G18690.1 100 PWTEEEHKKFLEGLRQLGKGDWRGISKNFVTSRTATQVASHAQKY 144
8*******************************************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 265 aa
Download sequence Send
to blast |
MEQHEEAAER KPSPPVIFRL FGVEVRGGGG GVDEEEYEEE EVEGGLFIKK SSSMPNLTSI 60
DPLPVPADGG KRRASDDSEL ASGQQKRRRR KVLERKKGVP WTEEEHKKFL EGLRQLGKGD 120
WRGISKNFVT SRTATQVASH AQKYFLRQTN PGKKKRRASL FDVVAECSDD QLPSPQSVGT 180
KPPTQDIIHT DRGDVPILSY PVARGFRGDS VQVDELTEYV KRLKAAEDMS LSMISGLEMA 240
SSSISSLELS IAPPHCAIEA AIKVL
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 70 | 90 | KRRASDDSELASGQQKRRRRK |
| 2 | 85 | 90 | KRRRRK |
| 3 | 85 | 96 | KRRRRKVLERKK |
| 4 | 86 | 96 | RRRRKVLERKK |
| 5 | 152 | 156 | KKKRR |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that binds to 5'-TATCCA-3' elements in gene promoters. Derepresses weakly the sugar-repressed transcription of promoters containing SRS. Contributes to the sugar-repressed transcription of promoters containing 5'-TATCCA-3' elements. {ECO:0000269|PubMed:12172034}. |
| UniProt | Transcription activator that binds to 5'-TATCCA-3' elements in gene promoters. Derepress weakly the sugar-repressed transcription of promoters containing SRS. Contributes to the sugar-repressed transcription of promoters containing 5'-TATCCA-3' elements. {ECO:0000250|UniProtKB:Q7XC51}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by sucrose. Slightly repressed by gibberellic acid (GA). {ECO:0000269|PubMed:12172034}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK288986 | 0.0 | AK288986.1 Oryza sativa Japonica Group cDNA, clone: J090086G02, full insert sequence. |
