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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM10G08400.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 318aa MW: 33678.7 Da PI: 4.8806 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM10G08400.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.6 | 1.8e-19 | 114 | 164 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
+++GVr ++ +g+W+AeIrdp+ r r++lg+f tae Aa+a++aa+++l+g+
OGLUM10G08400.1 114 RFRGVRKRP-WGKWAAEIRDPV----RgVRVWLGTFPTAESAARAYDAAARRLRGA 164
69*******.**********63....56**************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 318 aa
Download sequence Send
to blast |
MSQTQSNSNQ THLPTPNPSS ARAMCGGAIL ADLIPSPPSG GHTNKNKRWR ISDDEDFEAA 60 FEEFDAGDDD SDSESEEVDE YDVVVDDDDS EDGVVVLPPP PPPVIPHERH GARRFRGVRK 120 RPWGKWAAEI RDPVRGVRVW LGTFPTAESA ARAYDAAARR LRGAKAKPNF PSAPPPSAAA 180 HRRKKRRAHA ATRSPSSPPA TSEVTAASAS ASSDVPAPAF ASFVGEPGHG GAKSMPTTSH 240 TSQPAPPATV ASENVDDPEV FDPYDVHGGL ASYFAGGAYE SLESLFAHGG DSAAVDQAAS 300 DHWPAALWSF ADDGSFCF
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK110269 | 0.0 | AK110269.1 Oryza sativa Japonica Group cDNA clone:002-163-C07, full insert sequence. |