 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OGLUM09G20790.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
NF-YB |
| Protein Properties |
Length: 167aa MW: 18208.2 Da PI: 4.7611 |
| Description |
NF-YB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OGLUM09G20790.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YB | 54.4 | 3.1e-17 | 34 | 129 | 6 | 95 |
NF-YB 6 rflPianvsrimkkvlPanak......iskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93
++lP a v r++k+ l + a + kda e + fi ++++ a+d c++ kr+tin+dd+l al ++ f ++vepl++ l+++r+
OGLUM09G20790.1 34 EELPKAIVRRLVKEKLAQVAAggaeviVNKDAMSAFAESARIFIHYLSATANDMCKESKRQTINADDVLKALDEMEFPEFVEPLNTSLQEFRNK 127
679**********99976543222333899**************************************************************97 PP
NF-YB 94 eg 95
++
OGLUM09G20790.1 128 NA 129
76 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 167 aa
Download sequence Send
to blast |
MAGETGEGGG SHSQPEKQPG QAAAAASMAE AEVEELPKAI VRRLVKEKLA QVAAGGAEVI 60
VNKDAMSAFA ESARIFIHYL SATANDMCKE SKRQTINADD VLKALDEMEF PEFVEPLNTS 120
LQEFRNKNAA RRSETTQKKA EKRRKTDKES LPQEQNDAAD NGKTDED
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK242634 | 0.0 | AK242634.1 Oryza sativa Japonica Group cDNA, clone: J090023D18, full insert sequence. |
