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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM09G16010.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
bHLH |
Protein Properties |
Length: 366aa MW: 38470.8 Da PI: 4.8282 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM09G16010.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 28.7 | 2.3e-09 | 184 | 231 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L++l+P + +k + Ka +L + ++Y++sLq
OGLUM09G16010.1 184 SHSLAERVRREKISQRMKVLQDLVPGC----NKVVGKALMLDEIINYVQSLQ 231
8*************************9....677*****************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 366 aa
Download sequence Send
to blast |
MDSDYVAGLL MSAAAAGLDL GVLDGGGGAF LETLCGGPGF AERAARLCGG GAGLFGLPAV 60 GNAERGGCSR EGSSVSDPAW AHATGGGGDN ARKRKAPASA AAGKDKDAVV GGGSSPCEVG 120 EAKAPDSKKC KAEVNPKVEE AASDGSVGDR VQKQGKGKNS SKPAAEPPKD YVHVRARRGQ 180 ATDSHSLAER VRREKISQRM KVLQDLVPGC NKVVGKALML DEIINYVQSL QQQVEFLSMK 240 LATVNPQLDF GNLSTLLQKD MFQSCGPSVN SVFPLESAGT AFPFCDQADF FQSFGLGAME 300 NQCSLDLANT ALPHTGSTQY AFQKQQRDLW EDNAFQYNDE QSQEDAVSAP NFDGQLQAAD 360 HTEIEF
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK059036 | 0.0 | AK059036.1 Oryza sativa Japonica Group cDNA clone:001-021-C10, full insert sequence. |