PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM09G15360.2
Organism
Oryza glumaepatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 414aa    MW: 45440.4 Da    PI: 7.1792
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM09G15360.2genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.22.8e-11104147141
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                      e++ k  rr+++NReAAr+sR+RKka+i++Le    + ++Le+e
  OGLUM09G15360.2 104 ERDPKTLRRLAQNREAARKSRLRKKAYIQQLESsriRLAQLEQE 147
                      6778999************************9633355555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.9E-9102152No hitNo description
SMARTSM003385.6E-7104203IPR004827Basic-leucine zipper domain
PfamPF001702.6E-8105147IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.082106148IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.19E-7108149No hitNo description
PROSITE patternPS000360111126IPR004827Basic-leucine zipper domain
PfamPF141445.9E-28212286IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
MDDAETLNIF PSQPMHVEPS PKGEISLVLS PAAVGTKMAR SPDHHHHHQQ QAAAAMEELA  60
TGSRRQDHHH LQHQPFAAEP AGINRDVKPV TAKKDHRRGV STGERDPKTL RRLAQNREAA  120
RKSRLRKKAY IQQLESSRIR LAQLEQELHT ARAQGVFFPG SGGLIGEGGG GKGVLLGGID  180
GVGGGGGGGL SSEAAMFDVE YGRWQEEHHR LMYELRAALQ QQLPEGELQV YVESCLAHHD  240
EVAAIKDGAI RGDVFHLISG VWMSPAERCF LWLGGFRPSE VIKMLVAHVE PLTEQQIVGV  300
YGLQQSALET EEALTQGLDA LYQSLSDTVV SDALSCPSNV ANYMGQMAVA INKLSTLEGF  360
VRQQVLTTRQ MARSLLAVSD YFHRLRTLSS LWVTRPRHPP HDHQPPPHSA APHT
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1031740.0AK103174.1 Oryza sativa Japonica Group cDNA clone:J033121H05, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015612565.10.0transcription factor TGA2 isoform X1
SwissprotQ52MZ21e-144TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A0E0B4N30.0A0A0E0B4N3_9ORYZ; Uncharacterized protein
STRINGOGLUM09G15360.10.0(Oryza glumipatula)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-119bZIP family protein