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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM09G05680.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 318aa MW: 35759.3 Da PI: 5.3247 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM09G05680.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 49.9 | 7.7e-16 | 71 | 120 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54
s+y+GVr++ +g+W+AeIrd + r r ++g+f ++eeAa+a+ a ++++
OGLUM09G05680.1 71 SKYRGVRRRA-WGKWAAEIRDpV-----RkSRKWIGTFNSEEEAAAAYLAQSNQFH 120
89*****777.**********44.....55******************88766665 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 318 aa
Download sequence Send
to blast |
MMVPSSRKVR VFCSDPDATD SSDEDDQNKK ERRFTREILI PMENSKTSKP VKTLVQCGTK 60 TVKDSEKEPT SKYRGVRRRA WGKWAAEIRD PVRKSRKWIG TFNSEEEAAA AYLAQSNQFH 120 EELMALKIQS SVSEREDLSS SVTISCVSSS QSCDQKIQAR PQEHKRVSVV INHETVEQKF 180 KAQPQAQKIK AQPEVQKRVS VKISHETEDE HLLNLPSTPK GKEISMGAVL GRIDEIPVSN 240 CVGHIDEFPP DDFTRLADAF PVSDFIGMAD VPLGDDYIGL ADISHLPLPI TDPKFDLDAE 300 LNWDGFNFAS LEQELNCL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CT831165 | 0.0 | CT831165.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI221K24, full insert sequence. |