 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OGLUM08G12880.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
bZIP |
| Protein Properties |
Length: 180aa MW: 20094.5 Da PI: 9.0857 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OGLUM08G12880.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 55.1 | 1.6e-17 | 36 | 96 | 3 | 63 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
+lkr rrk++NRe+A+rsR+RK++ ++ L+ v +L+ eNk+L +l++ ++ +a +s++
OGLUM08G12880.1 36 DLKRKRRKESNRESAKRSRLRKQQHLDDLTSQVNQLKMENKQLTTTLNMVTQSCAFAESQN 96
79****************************************************9777776 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 180 aa
Download sequence Send
to blast |
MTLSGGILSS GITSGSSHGT RSSGSEGDIQ LQVQMDLKRK RRKESNRESA KRSRLRKQQH 60
LDDLTSQVNQ LKMENKQLTT TLNMVTQSCA FAESQNSVLR TQMMELDSRL SALREIIFYM 120
NNGNQSPSNP TIAATTYPST TTMTAATTGH YDYYDAFTAN AWGSGMQMIQ QPIDQFLYQC
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 37 | 42 | KRKRRK |
| 2 | 38 | 43 | RKRRKE |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK100580 | 0.0 | AK100580.1 Oryza sativa Japonica Group cDNA clone:J023105M12, full insert sequence. |
| GenBank | AP005520 | 0.0 | AP005520.3 Oryza sativa Japonica Group genomic DNA, chromosome 8, PAC clone:P0426E02. |
| GenBank | AP014964 | 0.0 | AP014964.1 Oryza sativa Japonica Group DNA, chromosome 8, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012616 | 0.0 | CP012616.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 8 sequence. |
