PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM08G04900.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 127aa MW: 14561.7 Da PI: 10.3166 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35 | 3.2e-11 | 51 | 91 | 2 | 42 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 +++k +rr+++NReAAr+sR+RKka+i++Le+ +L OGLUM08G04900.4 51 PRDKIQRRLAQNREAARKSRLRKKAYIQNLETSRMKLAHLE 91 57999**************************8655554433 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.2E-8 | 47 | 102 | No hit | No description |
SMART | SM00338 | 1.5E-6 | 50 | 114 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.3E-8 | 52 | 91 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.68 | 52 | 104 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.5E-7 | 54 | 101 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 57 | 72 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence Send to blast |
MVVAPPPLTE PKFESQLALP LQHGDDQDDA AALQESPRHA SDSFEQEASK PRDKIQRRLA 60 QNREAARKSR LRKKAYIQNL ETSRMKLAHL EQEITRARQQ VRTKKIKRKP ACDEQILLHG 120 CPLLTYG |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK109294 | 1e-167 | AK109294.1 Oryza sativa Japonica Group cDNA clone:002-188-D03, full insert sequence. | |||
GenBank | CT833287 | 1e-167 | CT833287.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN040G01, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025883355.1 | 1e-61 | transcription factor TGAL10-like isoform X3 | ||||
Refseq | XP_025883356.1 | 1e-61 | transcription factor TGAL10-like isoform X3 | ||||
Swissprot | Q6ZBS8 | 9e-63 | TGL10_ORYSJ; Transcription factor TGAL10 | ||||
TrEMBL | A0A0E0ARI4 | 4e-87 | A0A0E0ARI4_9ORYZ; Uncharacterized protein | ||||
STRING | OGLUM08G04900.1 | 7e-62 | (Oryza glumipatula) | ||||
STRING | OBART08G04650.1 | 2e-63 | (Oryza barthii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10030.2 | 7e-25 | TGACG motif-binding factor 4 |
Publications ? help Back to Top | |||
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