PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM08G04900.2
Organism
Oryza glumaepatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 359aa    MW: 39704.9 Da    PI: 6.8886
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM08G04900.2genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.31.2e-115183234
                     XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  2 kelkrerrkqkNReAArrsRqRKkaeieeLeek 34
                     +++k +rr+++NReAAr+sR+RKka+i++Le+ 
  OGLUM08G04900.2 51 PRDKIQRRLAQNREAARKSRLRKKAYIQNLETS 83
                     57999*************************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-550113IPR004827Basic-leucine zipper domain
PfamPF001704.5E-85287IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.5315294IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.08E-75498No hitNo description
Gene3DG3DSA:1.20.5.1702.8E-855100No hitNo description
PROSITE patternPS0003605772IPR004827Basic-leucine zipper domain
PfamPF141441.1E-27139214IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MVVAPPPLTE PKFESQLALP LQHGDDQDDA AALQESPRHA SDSFEQEASK PRDKIQRRLA  60
QNREAARKSR LRKKAYIQNL ETSRMKLAHL EQEITRARQQ GAYINRSSNP ATLPAPIDSG  120
VVTFEVEYAQ WVEEQGRQTA ELRAALQAAA AEGPELRAAV EAALAHYDRL FAAKREAARR  180
DVFFVMSGVW RTGAERFFLW IAGFRPSEVI RVLAPQLEPM TERQAADVRG LQQKARHLED  240
ALSQGMDKLK QTLADSLLAE AVVVSTSCDA SPPPEEEPSS SAAGDGGCYM AQMGSAMGRL  300
SNLVAFVDHA DHLRQETLQN MYKILTLPQA ARGLLALGDY CQRLRALSSL WAARPREPA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCT8315140.0CT831514.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA129B22, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025883355.10.0transcription factor TGAL10-like isoform X3
RefseqXP_025883356.10.0transcription factor TGAL10-like isoform X3
SwissprotQ6ZBS80.0TGL10_ORYSJ; Transcription factor TGAL10
TrEMBLA0A0E0ARI20.0A0A0E0ARI2_9ORYZ; Uncharacterized protein
STRINGOGLUM08G04900.10.0(Oryza glumipatula)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10030.21e-108TGACG motif-binding factor 4
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]