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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM07G23550.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
GeBP |
Protein Properties |
Length: 328aa MW: 35673.4 Da PI: 9.6959 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM07G23550.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 107.8 | 8e-34 | 31 | 130 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifel 91
lfqrlw+eeDeiv+L+G+ +f+a +g+ +++ d+d fye +++++++ +sksqlveK+rrLK+K++++v++ + sg+ +sf+++h+q ife+
OGLUM07G23550.1 31 LFQRLWTEEDEIVILRGFAEFTAARGTafASHQyDTDPFYEDMRGRLQLGFSKSQLVEKLRRLKRKYRNCVSRlRGSGSAFSFRSPHEQAIFEI 124
79************************99877778***************************************8889***************** PP
DUF573 92 skkiWg 97
++ iW+
OGLUM07G23550.1 125 ARNIWR 130
*****8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MATPAAAGGG GGSGSAGGVG SSSGGGERRP LFQRLWTEED EIVILRGFAE FTAARGTAFA 60 SHQYDTDPFY EDMRGRLQLG FSKSQLVEKL RRLKRKYRNC VSRLRGSGSA FSFRSPHEQA 120 IFEIARNIWR PTNKHGRDGD SDDEDATQVT PAPVPVNTSP NGEVKSPTSG RQRRRRRGGD 180 FAATAPAAAP ATTNMVQPIQ PVQVPVSVPV KMDDTLPALS QTTMPITVTM EGSEPLRLPV 240 MPPQPAVLDA DKSCLTPLFK EMVRAVINIG SNPFGAQLSE PPHGLPMEGE KWRKQRILEL 300 EVYLKRIELL QDQVKATLEE LKSSAPGT
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP003749 | 0.0 | AP003749.3 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1136_D11. |
GenBank | AP014963 | 0.0 | AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence. |
GenBank | CP012615 | 0.0 | CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G04930.2 | 6e-35 | DNA-binding storekeeper protein-related transcriptional regulator |