|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
OGLUM06G26910.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
ERF |
Protein Properties |
Length: 186aa MW: 19781 Da PI: 6.5253 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM06G26910.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 54.3 | 3.3e-17 | 16 | 65 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr ++ +gr++AeIrdp k++ ++lg+f++ae Aa+a++ a+++l+g
OGLUM06G26910.1 16 RYRGVRKRP-SGRYAAEIRDPA---KKTPIWLGTFDSAEVAARAYDDAARSLRG 65
59*******.7*********83...36*************************99 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 186 aa
Download sequence Send
to blast |
MRKSKQPQPQ PSPEIRYRGV RKRPSGRYAA EIRDPAKKTP IWLGTFDSAE VAARAYDDAA 60 RSLRGPTART NFPLAAPSAP PPRPPAAAAA TSSHSSTVES WSGGAPRAAA SALARSAAPM 120 EATQEEDCHS YCGSSSSVLC EDGSDDAAAS RTPLPFDLNM PPPEEELDMA AVADQMGIRY 180 DTLLRL
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP003935 | 0.0 | AP003935.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0661G04. |
GenBank | AP005457 | 0.0 | AP005457.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0532H03. |
GenBank | AP014962 | 0.0 | AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence. |