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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM06G23150.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 392aa MW: 40716.9 Da PI: 8.9997 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM06G23150.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 43.9 | 6e-14 | 103 | 155 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55
+y+G r ++ +g+++AeIr + ++ r++lg+fgtaeeAa a++ a+ ++g
OGLUM06G23150.1 103 KYRGARKRP-WGKYAAEIRIR---NtmgVKERVWLGTFGTAEEAAWAYDTAATVIHG 155
8********.**********5...445588*********************977765 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 392 aa
Download sequence Send
to blast |
MGRPVKQKTT TWLVELLREY CQRAAAQATA GNGAVAAAAA VEGEINTDGL AALAAEAEGF 60 AAANGEGWVA PAVEGEGEGF VGAPVVEGEE GLTAELPVAA ERKYRGARKR PWGKYAAEIR 120 IRNTMGVKER VWLGTFGTAE EAAWAYDTAA TVIHGDKATT NFPRAPLRPA TTPVMRSMLV 180 FFGIAHLVRS LVPRARGPRG RGGGAGGRGR SRRRRAAAAA APSAPASEAP PPPPPSSALV 240 PEPELQVQGG RGERGRGRGR GRGGGRGGRR GRGRTPARVV AEDSPMLQAT TPAAAPAPAP 300 ALAPAPANQA IFQPMIIPPG GGVVAPDDFL LSAISDDEPV LLHKKPKLLG VYTPPDSPDQ 360 FVMEFFADLG DGDDILSSSF WQDPAGDGED TQ
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 257 | 266 | RGRGRGGGRG |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP005386 | 0.0 | AP005386.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, BAC clone:OSJNBa0019I19. |
GenBank | AP014962 | 0.0 | AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence. |