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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM06G08330.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 204aa MW: 22254.1 Da PI: 5.3427 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM06G08330.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 56.3 | 8.2e-18 | 13 | 63 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++ykGVr + +g+WvAeIr p++ r r++lg+++t+e+Aa+a +aa +l+g
OGLUM06G08330.1 13 KKYKGVRLRQ-WGKWVAEIRLPNS---RERVWLGSYDTPEKAARAFDAAFVCLRG 63
59*****998.**********933...5*********************999998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 204 aa
Download sequence Send
to blast |
MQTKNTAAPA PEKKYKGVRL RQWGKWVAEI RLPNSRERVW LGSYDTPEKA ARAFDAAFVC 60 LRGAGAADAA GLNFPDSPLP VVARTRDLRE VYAFAVSHAN RPPPVAGETA ATALAAMAAL 120 EHNEVRENIA PSSPLSAVQV AALPAGSFDW SQLMANSPPL YSPIVIGSHA YDDLAVWPTT 180 QPVEEFSEED NENEELKVYI LRQK
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP005545 | 0.0 | AP005545.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0638H11. |
GenBank | AP014962 | 0.0 | AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence. |