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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM06G06580.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 207aa MW: 21830.4 Da PI: 4.6034 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM06G06580.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 53.7 | 5e-17 | 29 | 78 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ykGVr + +g+W+AeIr ps+ r r++lg+++t+e+Aa+a +aa +l+g
OGLUM06G06580.1 29 KYKGVRLRQ-WGKWAAEIRLPSS---RERIWLGSYDTPEKAARAFDAAFICLRG 78
8*****998.**********965...4*********************999987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 207 aa
Download sequence Send
to blast |
MEPVSFMQKS AAAAADGGSA AQAAAERRKY KGVRLRQWGK WAAEIRLPSS RERIWLGSYD 60 TPEKAARAFD AAFICLRGVQ AIAGLNFPES PPPPTAARTG DLREVYAFAV SHANQPSAEA 120 APADIVVPAQ VATEESDGVV RGNAAPPPVQ VAAGSLDWSQ FMANPPPMYS PTATAGSQAM 180 WPVTAPAAEA DGEDDELATT CRWSFDA
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012614 | 0.0 | CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence. |