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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM06G06550.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 209aa MW: 23044.6 Da PI: 4.7673 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM06G06550.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 55.1 | 1.9e-17 | 15 | 64 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++kGVr + +g+WvAeIr p++ rkr++lg+++++e+Aa+a +aa +l+g
OGLUM06G06550.1 15 RHKGVRLRQ-WGKWVAEIRLPNS---RKRIWLGSYDSPEKAARAFDAAFICLRG 64
68****998.**********933...5*********************999998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 209 aa
Download sequence Send
to blast |
MQANTTQPAP EKERRHKGVR LRQWGKWVAE IRLPNSRKRI WLGSYDSPEK AARAFDAAFI 60 CLRGGEAIAG LNFPESPPAV VARTTDPREV LAFATSHANQ LLLLDAAIAQ EEEAHSFKKE 120 EEAQVEEKTA EESSDVVRAN AAPPPPVQVA GGSFDWSQLP LYSPTTTPAA EHWEEDNVEG 180 DIPVCSEMSV ETSSNSRYIG VVFQMHSYG
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP006056 | 0.0 | AP006056.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, BAC clone:B1172G12. |
GenBank | AP014962 | 0.0 | AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence. |
GenBank | CP012614 | 0.0 | CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence. |