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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM06G06520.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 212aa MW: 22629.9 Da PI: 4.5443 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM06G06520.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 57.6 | 3.1e-18 | 13 | 62 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr +k +g+Wv+eIr p++ r r++lg+++t+eeAa+a +aa +l+g
OGLUM06G06520.1 13 KYRGVRLRK-WGKWVSEIRLPNS---RERIWLGSYDTPEEAARAFDAAFVCLRG 62
8******99.**********933...5*********************999987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 212 aa
Download sequence Send
to blast |
MSSSSSSSAT ARKYRGVRLR KWGKWVSEIR LPNSRERIWL GSYDTPEEAA RAFDAAFVCL 60 RGGGAGGEAA GNGINFPDSP PAVARTSDPQ EVYAAAVSHA NNRPPPPPSA RATSSALPWE 120 EAPVVAAQEA AADMAPDVVV LPSSPVNVLA AAGSFEYWSQ QPLYSPTAAS LDLQRWMTAA 180 AAAEESIMED DDDEGTSDGL WSFHYSPTRS KW
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012614 | 0.0 | CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence. |