 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OGLUM06G05410.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
MYB_related |
| Protein Properties |
Length: 239aa MW: 26378.8 Da PI: 7.9532 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OGLUM06G05410.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 31.2 | 5.2e-10 | 190 | 237 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47
+W + E+e l ++v+q+G+g+Wk I + gR + ++k++w++
OGLUM06G05410.1 190 KWCALEEETLRKGVEQYGNGNWKDILTNNPdvfIGRKAMDLKDKWRNM 237
68888****************************99***********97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 239 aa
Download sequence Send
to blast |
MAAERIVGDG AIETWRAADE VTRAKYRLLA GEQRAREIEG KLGETIPQGN QISTPEVHKV 60
MDALKSSCAN LHCVVEDPLP AAKAAADEVL AARMDKAVDL NAGEVSNQPT ACDIAGPSAP 120
ADNLDAPRKG TAASLMDWNP TARTFQWEDS PDPDGSRSPI HRPQLPSPRR TTFSPLQPAD 180
NKAKRRKARK WCALEEETLR KGVEQYGNGN WKDILTNNPD VFIGRKAMDL KDKWRNMMR
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AY429017 | 0.0 | AY429017.1 Oryza sativa (japonica cultivar-group) ANTHER INDEHISCENCE1 (AID1) mRNA, complete cds. |
