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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM06G04110.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 349aa MW: 37380.4 Da PI: 4.5226 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM06G04110.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.1 | 2.1e-18 | 122 | 172 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
+++GVr ++ +g++ AeIr+ +++r++lg+f+taeeAa+ +++a+++l+g+
OGLUM06G04110.1 122 KFRGVRKRP-WGKYGAEIRV----SqQSARVWLGTFDTAEEAARVYDHAALRLRGP 172
89*******.**********....3245**************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 349 aa
Download sequence Send
to blast |
MIEAVVEKKA RRIVRGRWHV EASNEAAAAA PAVVAAPAPR VVRILYRDHD ATDSSGDDDG 60 EDDAPRRARL LVHEIHVARQ PVAMSPAAAA SSSQRRRVGP MKRRTEAAVD ATAAAEVAPE 120 RKFRGVRKRP WGKYGAEIRV SQQSARVWLG TFDTAEEAAR VYDHAALRLR GPSATTNFPV 180 TPTAPAPSPP PSRDTNAGAA SGYDESSDES QLVGSPVSVL RPMPARATAK KEAKEEDDSA 240 PDILGISAGD GLIFPFTGDV MNFPPPDEDM FGGGISFGEP TPPPMVFDDD CMARLGHVPN 300 DDVDDEHPVT SSYFLDDDLG DLPSWTEVDG FFSDVGGDDL FAAEPFPAL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012614 | 0.0 | CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence. |