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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM06G02990.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 302aa MW: 32606.1 Da PI: 4.4178 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM06G02990.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 40.8 | 5.3e-13 | 95 | 138 | 9 | 55 |
AP2 9 dkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g
OGLUM06G02990.1 95 HHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 138
6779******99966...3.6*************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 302 aa
Download sequence Send
to blast |
MNYIMVGYTL DKDYRLYPSS DPPKTLANHI VVGLVNDSGA QTNCFNLDCD GFHLQNSSFA 60 LGSSWSDSLS QHGGERYGVT LSIHRVSQIN LVLLHHHNGR WEARIGRVFG NKYLYLGTYS 120 TQEEAARAYD IAAIEYRGIN AVTNFDLSTY IRWLKPPSSS SAAGTPHHHG GGMVVGADRV 180 LAPAQSYPIS AAADDDVAGC WRPLPSPSSS TTTALSLLLR SSMFQELVAR QPVVEGDDGQ 240 LAVVSGDDAD ADADVKEPPP ESEYGEVFAS DDAAAAAAYG CSMYELDDSF ALIDDSVWNC 300 LI
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP003487 | 0.0 | AP003487.2 Oryza sativa Japonica Group genomic DNA, chromosome 6, BAC clone:OSJNBa0007O20. |
GenBank | AP003767 | 0.0 | AP003767.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0036F10. |
GenBank | AP014962 | 0.0 | AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence. |