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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM05G28130.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 272aa MW: 29579.2 Da PI: 10.119 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM05G28130.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61 | 2.7e-19 | 97 | 147 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr++ +g+WvAeIr p + r r++lg+++++e Aa a+++a+ kl+ge
OGLUM05G28130.1 97 LYRGVRQRQ-WGKWVAEIRLPQN---RVRVWLGTYDSPETAAHAYDRAAFKLRGE 147
59****999.**********954...5**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 272 aa
Download sequence Send
to blast |
MDASLRTLPP ASFPGEVRSA VSSLLLSPGG SALDTVFSHL PPPVTIPPLG SSVYYRQSEL 60 LRHFAASQAA QAQSATAAAS SSSAAAAGLD DGAPRKLYRG VRQRQWGKWV AEIRLPQNRV 120 RVWLGTYDSP ETAAHAYDRA AFKLRGEYAR LNFPGVMDGR DCPDNLRQLR DAVDAKIQAI 180 RVRMARKRAR ARRQREESKK SQRAEDAKAA TPSRPVASER AASETTTTTT TSSSYGSPDG 240 VLSMSAASVD GDCPLERMPS FDPELIWEML NF
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CT837611 | 0.0 | CT837611.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA042N08, full insert sequence. |