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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM05G28080.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
WRKY |
Protein Properties |
Length: 278aa MW: 29728.2 Da PI: 4.7877 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM05G28080.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 82 | 5.9e-26 | 101 | 161 | 1 | 58 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58
ldDg +WrKYGqK++ g+++pr+Y+rCt++ gC+++k+v+r++ dp +++++Y g+H++
OGLUM05G28080.1 101 LDDGLSWRKYGQKDILGAKYPRAYFRCTHRhtqGCNATKQVQRADGDPLLFDVVYLGDHTC 161
58***************************98999*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 278 aa
Download sequence Send
to blast |
MVELCGGEGE GQIMLATELA QLRAMARELE AKMDPDRVAA RELCRALASS VDRSIRLAAS 60 CFPPPEHPPP AAGNAGRDAA KGMAKVRRQV RVTSVQDTAS LDDGLSWRKY GQKDILGAKY 120 PRAYFRCTHR HTQGCNATKQ VQRADGDPLL FDVVYLGDHT CGQAAVAAVA QSAPPEHAGQ 180 EQQRQSSLLA AGTEGIHQQV VAEPMEAAAA AAPFLFTSTA AGGVDDGYFS FISPANSDCQ 240 FSSDFSAGSV GVDMDHEACF EDLFSNTLEF FQSEIQNL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK108389 | 0.0 | AK108389.1 Oryza sativa Japonica Group cDNA clone:002-142-F03, full insert sequence. |