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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM05G22780.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 193aa MW: 20219.7 Da PI: 10.1627 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM05G22780.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.1 | 5.3e-19 | 22 | 71 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr ++ +gr++AeIrd ++ ++r++lg+++t+ eAa a+++a+ +l+g
OGLUM05G22780.1 22 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTYDTPVEAALAYDRAAVALRG 71
6********.**********883....5**********************99997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 193 aa
Download sequence Send
to blast |
MELDMGAGGG GGVVGGGRAE AHYRGVRKRP WGRYAAEIRD PWKKTRVWLG TYDTPVEAAL 60 AYDRAAVALR GVKARTNFGS GSSGGGGVGG HGHGHSHSHS HAQLPQLHHR LHPPRPPQGP 120 GHFGGLDISH PSPWHYVYFP ARVQAMAPAA AGHVAAHVAA SLPSTTLELR TGPSAGELPF 180 DLNEPPPALL FGS
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC108523 | 0.0 | AC108523.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OJ1118_C04, complete sequence. |
GenBank | AK242393 | 0.0 | AK242393.1 Oryza sativa Japonica Group cDNA, clone: J080064G22, full insert sequence. |
GenBank | AP014961 | 0.0 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |
GenBank | CP012613 | 0.0 | CP012613.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 5 sequence. |