|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
OGLUM05G14230.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
ERF |
Protein Properties |
Length: 199aa MW: 20846.2 Da PI: 6.9491 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM05G14230.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.5 | 1.8e-19 | 54 | 102 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+G+r+++ +grW+AeIrdp++ +r++lg++ taeeAa+a++ a++ ++g
OGLUM05G14230.1 54 YRGIRRRP-WGRWAAEIRDPRK---GARVWLGTYATAEEAARAYDVAARDIRG 102
9*******.**********954...4***********************9998 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 199 aa
Download sequence Send
to blast |
MCGGAIIADF VPPAGARRAA ASDVSENAVL SAAGAGDESF AAAKAPAPGR KTAYRGIRRR 60 PWGRWAAEIR DPRKGARVWL GTYATAEEAA RAYDVAARDI RGAKAKLNFP PTIGAAAAPP 120 PPKKRRKAAA AANHHHQQQQ QESSGSSSAS SLPPTPPPAA EHQLRECMSG LEAFLGLEEE 180 DDDDGGAGEP WDAVDMMLE
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:9159183}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: By 1-aminocyclopropane-1-carboxylic acid (ACC, ethylene precursor), methyl jasmonate (MeJA), and Botrytis cinerea. Also induced by cadmium. {ECO:0000269|PubMed:18836139, ECO:0000269|PubMed:9159183}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AK100184 | 0.0 | AK100184.1 Oryza sativa Japonica Group cDNA clone:J023031H12, full insert sequence. |
Publications
? help Back to Top |
- Bueso E, et al.
The lithium tolerance of the Arabidopsis cat2 mutant reveals a cross-talk between oxidative stress and ethylene. Plant J., 2007. 52(6): p. 1052-65 [PMID:17931347] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Chen YC, et al.
Root defense analysis against Fusarium oxysporum reveals new regulators to confer resistance. Sci Rep, 2014. 4: p. 5584 [PMID:24998294] - Deslauriers SD,Alvarez AA,Lacey RF,Binder BM,Larsen PB
Dominant gain-of-function mutations in transmembrane domain III of ERS1 and ETR1 suggest a novel role for this domain in regulating the magnitude of ethylene response in Arabidopsis. New Phytol., 2015. 208(2): p. 442-55 [PMID:25988998] - Bui LT,Giuntoli B,Kosmacz M,Parlanti S,Licausi F
Constitutively expressed ERF-VII transcription factors redundantly activate the core anaerobic response in Arabidopsis thaliana. Plant Sci., 2015. 236: p. 37-43 [PMID:26025519] - Gasch P, et al.
Redundant ERF-VII Transcription Factors Bind to an Evolutionarily Conserved cis-Motif to Regulate Hypoxia-Responsive Gene Expression in Arabidopsis. Plant Cell, 2016. 28(1): p. 160-80 [PMID:26668304] - Liu W, et al.
Ethylene response factor AtERF72 negatively regulates Arabidopsis thaliana response to iron deficiency. Biochem. Biophys. Res. Commun., 2017. 491(3): p. 862-868 [PMID:28390898] - Yao Y,Chen X,Wu AM
ERF-VII members exhibit synergistic and separate roles in Arabidopsis. Plant Signal Behav, 2017. 12(6): p. e1329073 [PMID:28537474]
|