|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
OGLUM05G13290.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
ERF |
Protein Properties |
Length: 419aa MW: 45148.2 Da PI: 4.5349 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM05G13290.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.6 | 1.6e-18 | 133 | 183 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++++GVr++ +g+WvAeIr+p + r r +lg+f tae Aa a+++a+++++g
OGLUM05G13290.1 133 CDFRGVRQRT-WGKWVAEIREP---N-RqSRLWLGTFPTAEAAACAYDEAARAMYG 183
689****999.**********8...3.35************************998 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009408 | Biological Process | response to heat |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009651 | Biological Process | response to salt stress |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 419 aa
Download sequence Send
to blast |
MTVDQRTTAK AIMPPVEMPP VQPGRKCGGE ESTGNLDSVQ PIAGALPCNE HALLAQQTPK 60 GDAPSVGSKI WKKRPRRSRD GPTSVAETIK RWAELNNQQE LDPQGPKKAR KAPAKGSKKG 120 CMKGKGGPEN TRCDFRGVRQ RTWGKWVAEI REPNRQSRLW LGTFPTAEAA ACAYDEAARA 180 MYGPMARTNF GQHHAPAASV QVAQAAVKCA LPGGGLTASK SRTSTQGASA DVQDVLTGGL 240 SACESTTTTI NNQSDVVSTL HKPEEVSEIS SPLRAPPAVL EDGSNEDKAE SVTYDENIVS 300 QQRAPPEAEA SNGRGEEVFE PLEPIASLPE DQGDYCFDID EMLRMMEADP TNEGLWKGDK 360 DGSDAILELG QDEPFYYEGV DPGMLDNLLR SDEPAWLSAD PAMFISGGFE DDSQFFEGL
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE). Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. Involved in drought and heat-shock stress tolerance. {ECO:0000269|PubMed:20049613}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: By heat shock, high-salt and drought stresses. {ECO:0000269|PubMed:20049613}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | JF915845 | 0.0 | JF915845.1 Oryza sativa dehydration responsive element binding protein 2B isoform c (DREB2B) mRNA, complete cds, alternatively spliced. |