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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM05G12060.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 221aa MW: 23819.4 Da PI: 5.7264 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM05G12060.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 31.7 | 4e-10 | 51 | 85 | 18 | 55 |
AP2 18 eIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
eIrdp + kr +lg+f+taeeAa+ ++ a+++++g
OGLUM05G12060.1 51 EIRDP-----SlqKRLWLGTFDTAEEAAAVYDDAALRIKG 85
79999.....445************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 221 aa
Download sequence Send
to blast |
MSPADSLAAG RSRRVGASMP RPKRVRVYFV DADATDTDSS GDERSRPRVR EIRDPSLQKR 60 LWLGTFDTAE EAAAVYDDAA LRIKGSHAVT NFPSDSDTPS AKAKQMKLHP RRHTTPDKTT 120 PSSSTAAAAK ASVPDPKPAP PEEDRANDSS FNPFASPTSV LRYAAADEVT APSFEHLLVE 180 LGDLSAPPPS TKAAEFDWLP WWEGEDFVTA GLTASNAVSV K
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC124141 | 0.0 | AC124141.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OSJNBa0065C11, complete sequence. |
GenBank | AK110613 | 0.0 | AK110613.1 Oryza sativa Japonica Group cDNA clone:002-168-H06, full insert sequence. |
GenBank | AP014961 | 0.0 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |