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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM05G05910.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 269aa MW: 29102.7 Da PI: 10.6535 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM05G05910.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 66.6 | 4.9e-21 | 60 | 110 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+++GVr+++ +grW+AeIrdp+eng +r++lg+f+tae Aa+a++ a ++l+g
OGLUM05G05910.1 60 RFTGVRRRP-WGRWAAEIRDPKENG--RRVWLGTFDTAEAAAAAYDDACLRLRG 110
689******.***********9998..*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0005199 | Molecular Function | structural constituent of cell wall |
Sequence ? help Back to Top |
Protein Sequence Length: 269 aa
Download sequence Send
to blast |
MAMEGEVEGG GRRRVVRIIF RDEDATDSSS SEEEGEGEVV AARRVVVKRT RLRCQEVERR 60 FTGVRRRPWG RWAAEIRDPK ENGRRVWLGT FDTAEAAAAA YDDACLRLRG PGAALNLPSR 120 RCVAPAPPPP PPPPPPTAEE KKPLLFPLPL PPRKKPLLYP PPLPPKKKPL PPPSPPPQPP 180 LPEKENTPLP PLLLPPKKKP LPPPSPTAAA KEEPIELEHA APPPPFVPRS VWPLLASGGG 240 GKRKKQSGCG GRIPALNTAA AAVEETGRA
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP005516 | 0.0 | AP005516.5 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OSJNBa0066H10. |
GenBank | AP005764 | 0.0 | AP005764.5 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21. |
GenBank | AP014963 | 0.0 | AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence. |