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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM04G24780.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 223aa MW: 22931.1 Da PI: 10.2507 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM04G24780.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.4 | 8.4e-19 | 24 | 74 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++++GVr ++ +gr++AeIrdp r +r++lg+f+tae Aa+a++ a++ ++g
OGLUM04G24780.1 24 PRFRGVRKRP-WGRYAAEIRDP---A-RkARVWLGTFDTAEAAARAYDSAALHFRG 74
689*******.**********8...2.35***********************9998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 223 aa
Download sequence Send
to blast |
MAPRNAAEAV AVAVAEGGGA GMEPRFRGVR KRPWGRYAAE IRDPARKARV WLGTFDTAEA 60 AARAYDSAAL HFRGPKAKTN FPVAFAHAHH HAPPPPPLPK AAALAVVSPT SSTVESSSRD 120 TPAAAPVAAA AKAQVPASPS LDLSLGMSAM VAAQPFLFLD PRVAVTVAVA APVPRRPAVV 180 SFKKEVARLD EQSDTGSSSS VVDASPAVGV GLDLNLPPPT EEA
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AL606684 | 0.0 | AL606684.3 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence. |
GenBank | AP014960 | 0.0 | AP014960.1 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence. |