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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM04G22260.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 219aa MW: 23899.7 Da PI: 5.36 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM04G22260.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 54.7 | 2.5e-17 | 51 | 101 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ ykGVr + grWv+e+r+p g ++r++lg+f tae+Aa+a++ a+ +l+g
OGLUM04G22260.1 51 PVYKGVRSRN-PGRWVCEVREP--HG-KQRIWLGTFETAEMAARAHDVAAMALRG 101
68****9666.9******9996..33.5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009631 | Biological Process | cold acclimation |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 219 aa
Download sequence Send
to blast |
MEWAYYGSGY SSSGTPSPVG GDGDEDSYMT VSSAPPKRRA GRTKFKETRH PVYKGVRSRN 60 PGRWVCEVRE PHGKQRIWLG TFETAEMAAR AHDVAAMALR GRAACLNFAD SPRRLRVPPL 120 GAGHEEIRRA AVEAAELFRP APGQHNAAAE AAAAVAAQAT AASAELFADF PCYPMDGLEF 180 EMQGYLDMAQ GMLIEPPPLA GQSTWAEEDY DCEVNLWSY
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (By similarity). {ECO:0000250}. |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AL606640 | 0.0 | AL606640.4 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04, complete sequence. |
GenBank | AP014960 | 0.0 | AP014960.1 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence. |
GenBank | AY114110 | 0.0 | AY114110.1 Oryza sativa (japonica cultivar-group) apetala2 domain-containing CBF-1-like protein mRNA, complete cds. |
GenBank | AY785896 | 0.0 | AY785896.1 Oryza sativa (japonica cultivar-group) cultivar Nipponbare OsDREB1E (DREB1E) gene, complete cds. |
GenBank | CP012612 | 0.0 | CP012612.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 4 sequence. |
GenBank | CR855158 | 0.0 | CR855158.1 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0147H17, complete sequence. |