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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM03G41320.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
WRKY |
Protein Properties |
Length: 391aa MW: 42220.2 Da PI: 7.2983 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM03G41320.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 98 | 6.1e-31 | 202 | 260 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY+ eHnh+
OGLUM03G41320.1 202 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCMARKQVERSRSDPNMLVITYTAEHNHP 260
699************************998****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 391 aa
Download sequence Send
to blast |
MDMMEEEAAN AATAQAAAAG DLADVVARAN ARAFLVSTPH HHPSPLHPLP PPPPPMPQAP 60 HQYYPAPQIT IPYHHHHHHG ELRRPTTIAY TDAPVPFETA GPPSTVVDSY HHLTPGDAGY 120 GMPRPLALQI SQHALCGGGD VVMGSGGAGA ADDGEEAIRI SPLTPSAHHQ MMKRKNEVKK 180 VVCIPAPPAT SSRGGGGEVI PSDLWAWRKY GQKPIKGSPY PRGYYRCSSS KGCMARKQVE 240 RSRSDPNMLV ITYTAEHNHP WPMQRNVLAG YARSHHSTHA TASSSRHKQQ QQQQTNQLQP 300 ALITSSSSSS SSPFNLYADV VLGGQQANMM MTTTEGAGTG LGIQPSAADE VFAELEELEP 360 DNPTMINANM QVYSTTSRPG VSSYDHQWHK F
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK109795 | 0.0 | AK109795.1 Oryza sativa Japonica Group cDNA clone:002-147-E06, full insert sequence. |