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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM03G28230.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
NF-YA |
Protein Properties |
Length: 390aa MW: 40721.6 Da PI: 8.0122 |
Description |
NF-YA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM03G28230.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | CBFB_NFYA | 95.8 | 4.8e-30 | 205 | 261 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
d+p+YVNaKQy++Il+RR +Rak+++e++l k+rkpylheSRh+hA+rR+RgsgGrF
OGLUM03G28230.1 205 DAPIYVNAKQYEGILRRRRARAKAQRENRL-VKGRKPYLHESRHRHAMRRARGSGGRF 261
68****************************.**************************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 390 aa
Download sequence Send
to blast |
MAIAVEEGLH LPPQAEILLD AIGGVAVACV LEPPCFSFSL SLSSARETTT TVAAAMLSFK 60 QSHEGFGHVA AAGAGPQQQQ QPWWAGSQLL YGEASPEEAA LRDGGQFQVV PGGRAALDPA 120 APEPEKTAVP SMPKRGGGGG APEVLKFSVF SGNLEPGDTG EKNREHSATI AMQSLLPEYN 180 GHFELGLGQS MSGGRMLLPL NAPADAPIYV NAKQYEGILR RRRARAKAQR ENRLVKGRKP 240 YLHESRHRHA MRRARGSGGR FLNTKKEATA AGCGGSSKTP LASLVSPADV VHRPGSRGGG 300 AGRASSLSGS DVSSPGGGMY DHHRHDDADA ADHYNSIDHH LRTPFFTPLP IIMDSGGGGG 360 DHASHSAAAV AAPFRWATAA GDGCCELLKA
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 245 | 254 | RHRHAMRRAR |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK106398 | 0.0 | AK106398.1 Oryza sativa Japonica Group cDNA clone:002-102-F12, full insert sequence. |