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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OGLUM03G19400.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
GeBP |
Protein Properties |
Length: 178aa MW: 19238.2 Da PI: 6.7999 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OGLUM03G19400.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 87.9 | 1.2e-27 | 82 | 154 | 2 | 71 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk 71
lfqrlw+eeDeiv+L+++ +f+a++g+ +++ d+d fye +++++++++sksqlveK+rrLK+K++++v++
OGLUM03G19400.1 82 LFQRLWTEEDEIVILRAFAEFTAQRGTafASHQyDTDPFYEDMRRRLQLDFSKSQLVEKLRRLKRKYRNCVDR 154
79*************************9977778***********************************9998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 178 aa
Download sequence Send
to blast |
MLPTVVDDPS AAAAAAVGAA ASSSFPDADV YGNGDSDDID FPSDPNHATT QAFSSATAAA 60 AAAGPGGGGG AGSGSGGERR PLFQRLWTEE DEIVILRAFA EFTAQRGTAF ASHQYDTDPF 120 YEDMRRRLQL DFSKSQLVEK LRRLKRKYRN CVDRLRATGH LGRWDGDRRW RRLLGVTG
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC082644 | 0.0 | AC082644.10 Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence. |
GenBank | AK243208 | 0.0 | AK243208.1 Oryza sativa Japonica Group cDNA, clone: J100042A05, full insert sequence. |
GenBank | AP014959 | 0.0 | AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. |
GenBank | CT837748 | 0.0 | CT837748.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA129A20, full insert sequence. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G04930.2 | 4e-25 | DNA-binding storekeeper protein-related transcriptional regulator |