PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM03G15460.3
Organism
Oryza glumaepatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 382aa    MW: 42662.4 Da    PI: 8.211
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM03G15460.3genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.91.4e-1097127434
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34 
                       k+ rr+++NReAAr+sR+RKka++++Le  
  OGLUM03G15460.3  97 QKVLRRLAQNREAARKSRLRKKAYVQQLESS 127
                      5899************************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.2E-794157IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.87596140IPR004827Basic-leucine zipper domain
PfamPF001701.5E-798128IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.55E-799141No hitNo description
Gene3DG3DSA:1.20.5.1704.5E-8100140No hitNo description
PROSITE patternPS000360101116IPR004827Basic-leucine zipper domain
PfamPF141445.7E-33180255IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MSVGLVLILR CRCRRLWLGE VGRAAAFRRS FASCCVSYTS WEEEEEEPGM ADASSRTDTS  60
TVLDTDDKNQ MVDGQSGAIV PSNSSDRSDR SDKPMDQKVL RRLAQNREAA RKSRLRKKAY  120
VQQLESSKLK LASLEQEINK ARQQGIYISS SGDQTHAMSG NGAMTFDLEY ARWLEEQNKQ  180
INELRTAVNA HASDSDLRLI VDGIMAHYDE IFRLKGVAAK ADVFHILSGM WKTPAERCFL  240
WLGGFRSSEL LKLLVNQLEP LTEQQLLGLS NLQQSSQQAE DALSQGMEAL QQSLADTLAG  300
SLGPSGSSGN VANYMGQMAM AMGKLGTLEN FLRQADNLRQ QTLHQMQRIL TIRQAARALL  360
AIHDYFSRLR ALSSLWLARP RE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2422570.0AK242257.1 Oryza sativa Japonica Group cDNA, clone: J075183E21, full insert sequence.
GenBankAY6204140.0AY620414.1 Oryza sativa (japonica cultivar-group) clone OSJNBa0005J15 bZIP transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015632465.10.0transcription factor TGA2.2
RefseqXP_015632466.10.0transcription factor TGA2.2
RefseqXP_015632467.10.0transcription factor TGA2.2
SwissprotQ6IVC30.0TGA22_ORYSJ; Transcription factor TGA2.2
TrEMBLA0A0D9Z6H00.0A0A0D9Z6H0_9ORYZ; Uncharacterized protein
STRINGOPUNC03G14770.10.0(Oryza punctata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-137TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Chern M,Fitzgerald HA,Canlas PE,Navarre DA,Ronald PC
    Overexpression of a rice NPR1 homolog leads to constitutive activation of defense response and hypersensitivity to light.
    Mol. Plant Microbe Interact., 2005. 18(6): p. 511-20
    [PMID:15986920]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]